Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.33□□□□□ -0.43
APCP25054 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 FUCA1P1-201ENST00000374476 1351 ntBASIC12.33□□□□□ -0.44
APCP25054 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APCP25054 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APCP25054 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APCP25054 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APCP25054 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 AC110057.1-201ENST00000636031 898 ntBASIC12.33□□□□□ -0.44
APCP25054 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.33□□□□□ -0.44
APCP25054 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.33□□□□□ -0.44
APCP25054 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.33□□□□□ -0.44
APCP25054 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APCP25054 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 AHCYP3-201ENST00000420053 1279 ntBASIC12.33□□□□□ -0.44
APCP25054 PPP1R2P4-201ENST00000424051 595 ntBASIC12.33□□□□□ -0.44
APCP25054 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.33□□□□□ -0.44
APCP25054 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.33□□□□□ -0.44
APCP25054 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.33□□□□□ -0.44
APCP25054 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.33□□□□□ -0.44
APCP25054 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APCP25054 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APCP25054 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 AL137077.2-201ENST00000635124 1608 ntBASIC12.32□□□□□ -0.44
APCP25054 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 AC092570.1-201ENST00000414446 469 ntBASIC12.32□□□□□ -0.44
APCP25054 OR8T1P-201ENST00000421347 918 ntBASIC12.32□□□□□ -0.44
APCP25054 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.32□□□□□ -0.44
APCP25054 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 AC023968.2-201ENST00000560593 1049 ntBASIC12.32□□□□□ -0.44
APCP25054 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.32□□□□□ -0.44
APCP25054 AL118522.1-201ENST00000611368 560 ntBASIC12.32□□□□□ -0.44
APCP25054 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.32□□□□□ -0.44
APCP25054 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.32□□□□□ -0.44
APCP25054 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
APCP25054 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.32□□□□□ -0.44
APCP25054 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APCP25054 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APCP25054 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
APCP25054 EEF1DP5-201ENST00000431410 772 ntBASIC12.32□□□□□ -0.44
APCP25054 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.32□□□□□ -0.44
APCP25054 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.32□□□□□ -0.44
APCP25054 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 AC006116.2-201ENST00000589958 988 ntBASIC12.32□□□□□ -0.44
APCP25054 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.32□□□□□ -0.44
APCP25054 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.32□□□□□ -0.44
APCP25054 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.32□□□□□ -0.44
APCP25054 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APCP25054 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.32□□□□□ -0.44
APCP25054 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APCP25054 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
APCP25054 AC105250.1-201ENST00000509378 2057 ntBASIC12.31□□□□□ -0.44
APCP25054 SALL4P5-201ENST00000419001 1760 ntBASIC12.31□□□□□ -0.44
APCP25054 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms