Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.2■□□□□ 0.5
NCLP19338 KRT8P23-201ENST00000560090 1207 ntBASIC18.2■□□□□ 0.5
NCLP19338 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NCLP19338 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 AC010327.5-201ENST00000586923 3061 ntBASIC18.2■□□□□ 0.5
NCLP19338 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.2■□□□□ 0.5
NCLP19338 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 HLA-H-201ENST00000383620 1096 ntBASIC18.19■□□□□ 0.5
NCLP19338 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.19■□□□□ 0.5
NCLP19338 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.19■□□□□ 0.5
NCLP19338 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.19■□□□□ 0.5
NCLP19338 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.19■□□□□ 0.5
NCLP19338 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.19■□□□□ 0.5
NCLP19338 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AC015911.4-201ENST00000588022 1070 ntBASIC18.19■□□□□ 0.5
NCLP19338 AC084121.4-201ENST00000641598 221 ntBASIC18.19■□□□□ 0.5
NCLP19338 AF228730.8-201ENST00000642140 221 ntBASIC18.19■□□□□ 0.5
NCLP19338 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCLP19338 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCLP19338 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NCLP19338 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NCLP19338 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCLP19338 AC006504.5-208ENST00000588784 2401 ntBASIC18.19■□□□□ 0.5
NCLP19338 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NCLP19338 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.19■□□□□ 0.5
NCLP19338 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NCLP19338 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 FUK-202ENST00000378912 3925 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 AL023775.1-201ENST00000454907 1746 ntBASIC18.18■□□□□ 0.5
NCLP19338 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.18■□□□□ 0.5
NCLP19338 GPS2P2-201ENST00000430745 888 ntBASIC18.18■□□□□ 0.5
NCLP19338 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 IGHV3-62-201ENST00000520057 340 ntBASIC18.18■□□□□ 0.5
NCLP19338 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.18■□□□□ 0.5
NCLP19338 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms