Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.25■□□□□ 0.19
SYN1P17600 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.25■□□□□ 0.19
SYN1P17600 AC055811.3-201ENST00000584952 686 ntBASIC16.25■□□□□ 0.19
SYN1P17600 AC008825.2-201ENST00000603374 718 ntBASIC16.25■□□□□ 0.19
SYN1P17600 AL139339.2-201ENST00000608063 657 ntBASIC16.25■□□□□ 0.19
SYN1P17600 AC009560.1-201ENST00000620208 434 ntBASIC16.25■□□□□ 0.19
SYN1P17600 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.25■□□□□ 0.19
SYN1P17600 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.25■□□□□ 0.19
SYN1P17600 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYN1P17600 AL137783.1-201ENST00000623494 1896 ntBASIC16.25■□□□□ 0.19
SYN1P17600 AC124067.4-201ENST00000519691 2379 ntBASIC16.24■□□□□ 0.19
SYN1P17600 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.24■□□□□ 0.19
SYN1P17600 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SYN1P17600 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 HLA-DMA-203ENST00000395305 777 ntBASIC16.24■□□□□ 0.19
SYN1P17600 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.24■□□□□ 0.19
SYN1P17600 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.24■□□□□ 0.19
SYN1P17600 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.24■□□□□ 0.19
SYN1P17600 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.24■□□□□ 0.19
SYN1P17600 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.24■□□□□ 0.19
SYN1P17600 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.24■□□□□ 0.19
SYN1P17600 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.24■□□□□ 0.19
SYN1P17600 AC012073.1-201ENST00000606114 1108 ntBASIC16.24■□□□□ 0.19
SYN1P17600 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SYN1P17600 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.24■□□□□ 0.19
SYN1P17600 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYN1P17600 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 PCDHA14-201ENST00000506751 2298 ntBASIC16.24■□□□□ 0.19
SYN1P17600 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYN1P17600 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.23■□□□□ 0.19
SYN1P17600 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.23■□□□□ 0.19
SYN1P17600 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SYN1P17600 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SYN1P17600 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 RNA5SP359-201ENST00000364838 113 ntBASIC16.23■□□□□ 0.19
SYN1P17600 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.23■□□□□ 0.19
SYN1P17600 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.23■□□□□ 0.19
SYN1P17600 AC244197.1-201ENST00000456494 951 ntBASIC16.23■□□□□ 0.19
SYN1P17600 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.23■□□□□ 0.19
SYN1P17600 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.23■□□□□ 0.19
SYN1P17600 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.23■□□□□ 0.19
SYN1P17600 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.23■□□□□ 0.19
SYN1P17600 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYN1P17600 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms