Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.1□□□□□ -0.31
ACAA1P09110 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.1□□□□□ -0.31
ACAA1P09110 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.1□□□□□ -0.31
ACAA1P09110 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.1□□□□□ -0.31
ACAA1P09110 AL355385.1-201ENST00000606123 409 ntBASIC13.1□□□□□ -0.31
ACAA1P09110 AL391069.4-201ENST00000609583 481 ntBASIC13.1□□□□□ -0.31
ACAA1P09110 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.1□□□□□ -0.31
ACAA1P09110 AJ011932.1-201ENST00000621707 465 ntBASIC13.1□□□□□ -0.31
ACAA1P09110 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.1□□□□□ -0.31
ACAA1P09110 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.1□□□□□ -0.31
ACAA1P09110 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.1□□□□□ -0.31
ACAA1P09110 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ACAA1P09110 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.1□□□□□ -0.31
ACAA1P09110 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.09□□□□□ -0.31
ACAA1P09110 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.09□□□□□ -0.31
ACAA1P09110 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.09□□□□□ -0.31
ACAA1P09110 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 SRD5A3P1-201ENST00000603021 949 ntBASIC13.09□□□□□ -0.31
ACAA1P09110 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 OR2I1P-210ENST00000642037 4691 ntBASIC13.09□□□□□ -0.31
ACAA1P09110 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.09□□□□□ -0.31
ACAA1P09110 AC012508.2-201ENST00000567613 1472 ntBASIC13.09□□□□□ -0.31
ACAA1P09110 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ACAA1P09110 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 AC006504.5-208ENST00000588784 2401 ntBASIC13.09□□□□□ -0.31
ACAA1P09110 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ACAA1P09110 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ACAA1P09110 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ACAA1P09110 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
ACAA1P09110 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ACAA1P09110 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ACAA1P09110 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ACAA1P09110 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
ACAA1P09110 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ACAA1P09110 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 AGAP7P-201ENST00000582299 2062 ntBASIC13.08□□□□□ -0.32
ACAA1P09110 AGAP14-201ENST00000624701 2060 ntBASIC13.08□□□□□ -0.32
ACAA1P09110 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ACAA1P09110 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.08□□□□□ -0.32
ACAA1P09110 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms