Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC092902.6-201ENST00000641783 218 ntBASIC17.37■□□□□ 0.37
TPM2P07951 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM2P07951 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM2P07951 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM2P07951 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TPM2P07951 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TPM2P07951 SPCS2P4-201ENST00000436160 681 ntBASIC17.36■□□□□ 0.37
TPM2P07951 ACTG1P14-201ENST00000446382 1122 ntBASIC17.36■□□□□ 0.37
TPM2P07951 TIMM8BP1-201ENST00000452384 211 ntBASIC17.36■□□□□ 0.37
TPM2P07951 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM2P07951 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM2P07951 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 AC243562.1-201ENST00000560672 389 ntBASIC17.36■□□□□ 0.37
TPM2P07951 AC040169.1-201ENST00000565382 521 ntBASIC17.36■□□□□ 0.37
TPM2P07951 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM2P07951 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM2P07951 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 AC023274.1-201ENST00000418278 595 ntBASIC17.35■□□□□ 0.37
TPM2P07951 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.35■□□□□ 0.37
TPM2P07951 AC079140.1-201ENST00000508039 487 ntBASIC17.35■□□□□ 0.37
TPM2P07951 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 SLC25A1P1-201ENST00000528351 927 ntBASIC17.35■□□□□ 0.37
TPM2P07951 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.35■□□□□ 0.37
TPM2P07951 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TPM2P07951 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM2P07951 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM2P07951 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM2P07951 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPM2P07951 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.34■□□□□ 0.37
TPM2P07951 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TPM2P07951 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.34■□□□□ 0.37
TPM2P07951 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TPM2P07951 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM2P07951 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM2P07951 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TPM2P07951 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms