Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 Z92544.3-201ENST00000624747 417 ntBASIC14.24□□□□□ -0.13
OPN1SWP03999 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 AL645728.2-202ENST00000641679 227 ntBASIC14.24□□□□□ -0.13
OPN1SWP03999 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
OPN1SWP03999 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
OPN1SWP03999 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 AC138969.3-201ENST00000546612 1459 ntBASIC14.24□□□□□ -0.13
OPN1SWP03999 AC138932.2-201ENST00000548268 1459 ntBASIC14.24□□□□□ -0.13
OPN1SWP03999 AC126755.4-201ENST00000549796 1459 ntBASIC14.24□□□□□ -0.13
OPN1SWP03999 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
OPN1SWP03999 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
OPN1SWP03999 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
OPN1SWP03999 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
OPN1SWP03999 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.23□□□□□ -0.13
OPN1SWP03999 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 SNHG9-202ENST00000564014 471 ntBASIC14.23□□□□□ -0.13
OPN1SWP03999 SAMD11P1-201ENST00000571429 661 ntBASIC14.23□□□□□ -0.13
OPN1SWP03999 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.23□□□□□ -0.13
OPN1SWP03999 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
OPN1SWP03999 AC073592.8-201ENST00000624126 511 ntBASIC14.23□□□□□ -0.13
OPN1SWP03999 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 AC134684.3-201ENST00000641758 218 ntBASIC14.23□□□□□ -0.13
OPN1SWP03999 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
OPN1SWP03999 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.23□□□□□ -0.13
OPN1SWP03999 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
OPN1SWP03999 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
OPN1SWP03999 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 AC006504.5-208ENST00000588784 2401 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms