Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AC007787.1-201ENST00000588095 1583 ntBASIC11.98□□□□□ -0.49
TRGV3P03979 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRGV3P03979 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRGV3P03979 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRGV3P03979 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AL035633.1-201ENST00000406139 838 ntBASIC11.98□□□□□ -0.49
TRGV3P03979 NUS1P3-201ENST00000423502 862 ntBASIC11.98□□□□□ -0.49
TRGV3P03979 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.98□□□□□ -0.49
TRGV3P03979 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.98□□□□□ -0.49
TRGV3P03979 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV3P03979 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV3P03979 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV3P03979 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV3P03979 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms