Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MT-ND3P03897 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 AC022144.1-201ENST00000602255 1580 ntBASIC15.54■□□□□ 0.08
MT-ND3P03897 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 AC104581.4-201ENST00000623126 3052 ntBASIC15.54■□□□□ 0.08
MT-ND3P03897 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.54■□□□□ 0.08
MT-ND3P03897 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
MT-ND3P03897 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.54■□□□□ 0.08
MT-ND3P03897 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.54■□□□□ 0.08
MT-ND3P03897 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 AL138828.2-201ENST00000615812 383 ntBASIC15.54■□□□□ 0.08
MT-ND3P03897 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND3P03897 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND3P03897 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND3P03897 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.53■□□□□ 0.08
MT-ND3P03897 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MT-ND3P03897 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MT-ND3P03897 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MT-ND3P03897 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 FO393414.2-201ENST00000405153 598 ntBASIC15.53■□□□□ 0.08
MT-ND3P03897 PIN1P1-201ENST00000412108 996 ntBASIC15.53■□□□□ 0.08
MT-ND3P03897 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.53■□□□□ 0.08
MT-ND3P03897 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.53■□□□□ 0.08
MT-ND3P03897 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND3P03897 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND3P03897 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND3P03897 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms