Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSPG5O95196 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 CD8B2-202ENST00000417670 633 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 SERPINA13P-202ENST00000478994 924 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 AL391280.1-201ENST00000506969 1062 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.31■□□□□ 0.2
CSPG5O95196 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.31■□□□□ 0.2
CSPG5O95196 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.31■□□□□ 0.2
CSPG5O95196 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.31■□□□□ 0.2
CSPG5O95196 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSPG5O95196 AC244157.2-201ENST00000616239 1006 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 AP001002.3-201ENST00000623482 206 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 AC063926.3-201ENST00000624734 5658 ntBASIC16.31■□□□□ 0.2
CSPG5O95196 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CSPG5O95196 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
CSPG5O95196 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSPG5O95196 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CSPG5O95196 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG5O95196 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
CSPG5O95196 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 MIR648-201ENST00000385046 94 ntBASIC16.3■□□□□ 0.2
CSPG5O95196 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG5O95196 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG5O95196 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CSPG5O95196 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.3■□□□□ 0.2
CSPG5O95196 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.3■□□□□ 0.2
CSPG5O95196 SPCS2P2-201ENST00000603270 608 ntBASIC16.3■□□□□ 0.2
CSPG5O95196 AC073413.1-201ENST00000603927 732 ntBASIC16.3■□□□□ 0.2
CSPG5O95196 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CSPG5O95196 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSPG5O95196 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSPG5O95196 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 AL596087.1-201ENST00000400979 1969 ntBASIC16.29■□□□□ 0.2
CSPG5O95196 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG5O95196 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms