Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HCN1O60741 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HCN1O60741 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.27□□□□□ -0.12
HCN1O60741 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.27□□□□□ -0.13
HCN1O60741 AC074338.1-201ENST00000416825 156 ntBASIC14.27□□□□□ -0.13
HCN1O60741 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.27□□□□□ -0.13
HCN1O60741 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.27□□□□□ -0.13
HCN1O60741 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HCN1O60741 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.27□□□□□ -0.13
HCN1O60741 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 AL391069.4-201ENST00000609583 481 ntBASIC14.27□□□□□ -0.13
HCN1O60741 AL158212.4-201ENST00000624062 1286 ntBASIC14.27□□□□□ -0.13
HCN1O60741 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 AGAP7P-201ENST00000582299 2062 ntBASIC14.27□□□□□ -0.13
HCN1O60741 AGAP14-201ENST00000624701 2060 ntBASIC14.27□□□□□ -0.13
HCN1O60741 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HCN1O60741 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HCN1O60741 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HCN1O60741 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.27□□□□□ -0.13
HCN1O60741 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.27□□□□□ -0.13
HCN1O60741 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 CLK3P2-201ENST00000427566 1453 ntBASIC14.26□□□□□ -0.13
HCN1O60741 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN1O60741 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN1O60741 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 OR8S1-201ENST00000310194 1080 ntBASIC14.26□□□□□ -0.13
HCN1O60741 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN1O60741 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.26□□□□□ -0.13
HCN1O60741 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.26□□□□□ -0.13
HCN1O60741 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.26□□□□□ -0.13
HCN1O60741 AC092552.1-201ENST00000547243 906 ntBASIC14.26□□□□□ -0.13
HCN1O60741 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.26□□□□□ -0.13
HCN1O60741 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.26□□□□□ -0.13
HCN1O60741 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.26□□□□□ -0.13
HCN1O60741 CTBP2P3-201ENST00000585629 1255 ntBASIC14.26□□□□□ -0.13
HCN1O60741 MIR8072-201ENST00000614241 80 ntBASIC14.26□□□□□ -0.13
HCN1O60741 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HCN1O60741 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN1O60741 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HCN1O60741 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN1O60741 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN1O60741 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AC023024.2-201ENST00000623561 1993 ntBASIC14.25□□□□□ -0.13
HCN1O60741 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN1O60741 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN1O60741 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN1O60741 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms