Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DLK1-205ENST00000556051 469 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC23.55■■□□□ 1.36
CHD1O14646 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC23.55■■□□□ 1.36
CHD1O14646 RN7SL556P-201ENST00000582856 298 ntBASIC23.55■■□□□ 1.36
CHD1O14646 AC006986.1-201ENST00000612764 241 ntBASIC23.55■■□□□ 1.36
CHD1O14646 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD1O14646 F10-203ENST00000409306 1450 ntTSL 3 BASIC23.54■■□□□ 1.36
CHD1O14646 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD1O14646 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHD1O14646 AC117503.4-201ENST00000623229 1418 ntBASIC23.54■■□□□ 1.36
CHD1O14646 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHD1O14646 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC23.54■■□□□ 1.36
CHD1O14646 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 NDUFB10P1-201ENST00000567319 521 ntBASIC23.54■■□□□ 1.36
CHD1O14646 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC23.54■■□□□ 1.36
CHD1O14646 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHD1O14646 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD1O14646 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD1O14646 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD1O14646 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CHD1O14646 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 OR52M2P-201ENST00000414298 959 ntBASIC23.53■■□□□ 1.36
CHD1O14646 AC092903.1-201ENST00000466506 262 ntBASIC23.53■■□□□ 1.36
CHD1O14646 AC079414.2-201ENST00000567157 1104 ntBASIC23.53■■□□□ 1.36
CHD1O14646 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC23.53■■□□□ 1.36
CHD1O14646 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC23.53■■□□□ 1.36
CHD1O14646 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD1O14646 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC23.53■■□□□ 1.36
CHD1O14646 AP000845.1-201ENST00000581677 2131 ntBASIC23.53■■□□□ 1.36
CHD1O14646 RN7SL121P-201ENST00000584223 273 ntBASIC23.53■■□□□ 1.36
CHD1O14646 HCG18-241ENST00000602290 821 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD1O14646 COQ4-204ENST00000608951 781 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD1O14646 ESR1-214ENST00000638569 132 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD1O14646 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1O14646 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 AC138761.6-201ENST00000583997 1423 ntBASIC23.52■■□□□ 1.36
CHD1O14646 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CHD1O14646 AC092364.2-201ENST00000596710 2692 ntBASIC23.52■■□□□ 1.36
CHD1O14646 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD1O14646 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CHD1O14646 DKKL1P1-201ENST00000400550 698 ntBASIC23.52■■□□□ 1.36
CHD1O14646 FDPSP7-201ENST00000429043 1054 ntBASIC23.52■■□□□ 1.36
CHD1O14646 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CHD1O14646 CDK4P1-201ENST00000454213 828 ntBASIC23.52■■□□□ 1.36
CHD1O14646 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC23.52■■□□□ 1.36
CHD1O14646 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CHD1O14646 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD1O14646 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD1O14646 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD1O14646 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1O14646 PKD1P6-201ENST00000343738 4769 ntBASIC23.52■■□□□ 1.35
CHD1O14646 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CHD1O14646 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CHD1O14646 KHSRPP1-201ENST00000427983 1768 ntBASIC23.51■■□□□ 1.35
CHD1O14646 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD1O14646 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1O14646 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1O14646 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms