Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC22.04■■□□□ 1.12
HFM1A2PYH4 AL160314.3-201ENST00000556041 767 ntBASIC22.04■■□□□ 1.12
HFM1A2PYH4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HFM1A2PYH4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 CYP4F23P-201ENST00000593402 1579 ntBASIC22.03■■□□□ 1.12
HFM1A2PYH4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 RHOQP1-201ENST00000555758 579 ntBASIC22.03■■□□□ 1.12
HFM1A2PYH4 AC005962.1-201ENST00000584100 773 ntBASIC22.03■■□□□ 1.12
HFM1A2PYH4 AC020914.3-201ENST00000594712 304 ntBASIC22.03■■□□□ 1.12
HFM1A2PYH4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC22.03■■□□□ 1.12
HFM1A2PYH4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HFM1A2PYH4 CICP14-201ENST00000629111 2732 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 AL354702.1-201ENST00000442006 1960 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 TMBIM7P-202ENST00000641474 1516 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 HLA-DPB2-205ENST00000435074 1188 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 AC012441.2-201ENST00000444843 739 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AL035414.1-201ENST00000451327 857 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 RNA5SP423-201ENST00000517127 109 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 AC027601.3-201ENST00000622907 509 ntBASIC22.02■■□□□ 1.12
HFM1A2PYH4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HFM1A2PYH4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HFM1A2PYH4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC22.02■■□□□ 1.11
HFM1A2PYH4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
HFM1A2PYH4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC22.02■■□□□ 1.11
HFM1A2PYH4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
HFM1A2PYH4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HFM1A2PYH4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HFM1A2PYH4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HFM1A2PYH4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms