Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC018665.1-201ENST00000622927 1362 ntBASIC17.31■□□□□ 0.36
CLIC4Q9Y696 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 SPTLC1P1-201ENST00000447199 261 ntBASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 RRP7BP-205ENST00000566851 833 ntBASIC17.31■□□□□ 0.36
CLIC4Q9Y696 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AC027601.5-201ENST00000624065 2482 ntBASIC17.3■□□□□ 0.36
CLIC4Q9Y696 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 MEP1AP4-201ENST00000423244 1087 ntBASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.3■□□□□ 0.36
CLIC4Q9Y696 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 SERBP1P5-201ENST00000510079 1181 ntBASIC17.3■□□□□ 0.36
CLIC4Q9Y696 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 BX539320.1-201ENST00000623759 877 ntBASIC17.3■□□□□ 0.36
CLIC4Q9Y696 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC4Q9Y696 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AC134915.1-201ENST00000426461 574 ntBASIC17.29■□□□□ 0.36
CLIC4Q9Y696 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 INGX-202ENST00000489074 768 ntBASIC17.29■□□□□ 0.36
CLIC4Q9Y696 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AC093004.1-201ENST00000508850 424 ntBASIC17.29■□□□□ 0.36
CLIC4Q9Y696 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AC055876.2-201ENST00000531834 546 ntBASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AL359711.2-201ENST00000563105 872 ntBASIC17.29■□□□□ 0.36
CLIC4Q9Y696 AC124283.3-201ENST00000570869 594 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms