Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 CR383656.2-201ENST00000548656 2254 ntBASIC14.41□□□□□ -0.1
AP4S1Q9Y587 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AC005562.1-201ENST00000583030 3219 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 KRT8P24-201ENST00000560290 1559 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AC104457.1-201ENST00000401024 814 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AC022447.6-201ENST00000515522 438 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AL645728.2-202ENST00000641679 227 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 PEG13-201ENST00000631594 5667 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 KRT8P22-201ENST00000562317 1415 ntBASIC14.4□□□□□ -0.1
AP4S1Q9Y587 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP4S1Q9Y587 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
AP4S1Q9Y587 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
AP4S1Q9Y587 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms