Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AC125807.1-201ENST00000483097 614 ntBASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AC106028.4-201ENST00000614509 607 ntBASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 MIR4453-201ENST00000584019 89 ntBASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.52■□□□□ 0.4
R3HCC1Q9Y3T6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 AC126365.1-201ENST00000578585 1514 ntBASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.52■□□□□ 0.39
R3HCC1Q9Y3T6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 KLF2P3-201ENST00000451977 1087 ntBASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 MIR4321-201ENST00000592276 80 ntBASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.51■□□□□ 0.39
R3HCC1Q9Y3T6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms