Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COPS3Q9UNS2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COPS3Q9UNS2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COPS3Q9UNS2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COPS3Q9UNS2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 SERBP1P3-201ENST00000459980 809 ntBASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AL512361.1-201ENST00000554200 418 ntBASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AL139385.1-201ENST00000611744 3272 ntBASIC13.61□□□□□ -0.23
COPS3Q9UNS2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AC027601.5-201ENST00000624065 2482 ntBASIC13.61□□□□□ -0.23
COPS3Q9UNS2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 COL6A4P2-202ENST00000504443 2753 ntBASIC13.6□□□□□ -0.23
COPS3Q9UNS2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 KRT18P43-201ENST00000469825 1281 ntBASIC13.6□□□□□ -0.23
COPS3Q9UNS2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 AC007787.1-201ENST00000588095 1583 ntBASIC13.6□□□□□ -0.23
COPS3Q9UNS2 AC010327.4-202ENST00000591484 748 ntBASIC13.6□□□□□ -0.23
COPS3Q9UNS2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COPS3Q9UNS2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms