Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC00554-201ENST00000564841 3011 ntBASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CLCF1Q9UBD9 SSR4P1-203ENST00000599569 2260 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 GOLGA2P4-201ENST00000441462 777 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 HOMER2P2-201ENST00000451621 847 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AP003171.2-201ENST00000528208 925 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC106820.3-201ENST00000561653 397 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 OR10B1P-201ENST00000601666 907 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC138466.3-201ENST00000619983 221 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC136621.1-201ENST00000624017 2304 ntBASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLCF1Q9UBD9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CLUHP2-201ENST00000426660 1303 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms