Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 DOC2GP-202ENST00000514950 1163 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC015910.1-201ENST00000579400 975 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC005498.2-205ENST00000593218 784 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC027307.3-201ENST00000594262 1100 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC004233.3-201ENST00000607794 1269 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TMBIM7P-203ENST00000641617 1718 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 AC127383.1-201ENST00000444697 1800 ntBASIC10□□□□□ -0.81
LINC00474Q9P2X8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10□□□□□ -0.81
LINC00474Q9P2X8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
LINC00474Q9P2X8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms