Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 C2orf69P2-201ENST00000562032 1123 ntBASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMG20BQ9P0W2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMG20BQ9P0W2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 AL354989.2-201ENST00000435838 1540 ntBASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 RN7SL560P-201ENST00000577943 264 ntBASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 MIR4741-201ENST00000579822 90 ntBASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 CLUHP2-201ENST00000426660 1303 ntBASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMG20BQ9P0W2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms