Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMBRD1Q9NUN5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMBRD1Q9NUN5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LMBRD1Q9NUN5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AL137783.1-201ENST00000623494 1896 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 HLA-K-203ENST00000430151 1046 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 GPS2P2-201ENST00000430745 888 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 SLC25A1P1-201ENST00000528351 927 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 MIR6069-201ENST00000620069 79 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AL356585.2-201ENST00000625078 2396 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 ZNF259P1-201ENST00000407656 1365 ntBASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMBRD1Q9NUN5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
LMBRD1Q9NUN5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
LMBRD1Q9NUN5 KRT8P14-201ENST00000414254 1442 ntBASIC17.39■□□□□ 0.38
LMBRD1Q9NUN5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 C8orf49-201ENST00000525043 1968 ntBASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 MCCD1P2-201ENST00000423228 335 ntBASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ACTG1P14-201ENST00000446382 1122 ntBASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 AC026150.2-201ENST00000564693 1156 ntBASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 AL035456.1-201ENST00000456064 1369 ntBASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LMBRD1Q9NUN5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMBRD1Q9NUN5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LMBRD1Q9NUN5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMBRD1Q9NUN5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
LMBRD1Q9NUN5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms