Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 HSPA7-201ENST00000445535 1927 ntBASIC16.22■□□□□ 0.19
SIX2Q9NPC8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 ACKR1-201ENST00000368121 1240 ntBASIC16.22■□□□□ 0.19
SIX2Q9NPC8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AC093433.1-201ENST00000458048 571 ntBASIC16.22■□□□□ 0.19
SIX2Q9NPC8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 ENPP7P5-201ENST00000541031 1031 ntBASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.22■□□□□ 0.19
SIX2Q9NPC8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIX2Q9NPC8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 PIN1P1-201ENST00000412108 996 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AC022137.2-201ENST00000503482 481 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AP001063.1-201ENST00000568332 529 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AC140912.1-201ENST00000577171 1054 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AL603764.1-201ENST00000636452 321 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 AC003102.2-201ENST00000589195 1469 ntBASIC16.21■□□□□ 0.19
SIX2Q9NPC8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX2Q9NPC8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 AC027601.5-201ENST00000624065 2482 ntBASIC16.21■□□□□ 0.18
SIX2Q9NPC8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.21■□□□□ 0.18
SIX2Q9NPC8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.2■□□□□ 0.18
SIX2Q9NPC8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.2■□□□□ 0.18
SIX2Q9NPC8 DGCR5-201ENST00000399539 862 ntBASIC16.2■□□□□ 0.18
SIX2Q9NPC8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 AC022447.6-201ENST00000515522 438 ntBASIC16.2■□□□□ 0.18
SIX2Q9NPC8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX2Q9NPC8 TP53TG3HP-202ENST00000569755 579 ntBASIC16.2■□□□□ 0.18
SIX2Q9NPC8 MIR4745-201ENST00000577608 62 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms