Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC018665.1-201ENST00000622927 1362 ntBASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 TIMM17BP1-201ENST00000545713 516 ntBASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC027601.5-201ENST00000624065 2482 ntBASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
SHANK2-AS3Q9BTD1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC117489.1-201ENST00000625169 3217 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AP006288.1-201ENST00000446065 395 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 TPT1P11-201ENST00000458482 498 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 HLA-J-203ENST00000494367 1087 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF890P-202ENST00000530367 1156 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.71□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms