Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 AC139749.1-202ENST00000617529 3139 ntBASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 SPDYE19P-201ENST00000338590 713 ntBASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 DOC2GP-202ENST00000514950 1163 ntBASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 TPRX2P-201ENST00000535362 881 ntBASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.37□□□□□ -0.11
YIPF4Q9BSR8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 ST20-AS1-201ENST00000560255 4223 ntBASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 AC012508.2-201ENST00000567613 1472 ntBASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
YIPF4Q9BSR8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms