Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 AP001282.1-201ENST00000531301 1499 ntBASIC13.53□□□□□ -0.24
VRK1Q99986 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 AC015656.1-201ENST00000624209 3578 ntBASIC13.53□□□□□ -0.24
VRK1Q99986 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK1Q99986 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VRK1Q99986 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK1Q99986 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK1Q99986 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VRK1Q99986 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
VRK1Q99986 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
VRK1Q99986 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.52□□□□□ -0.24
VRK1Q99986 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.52□□□□□ -0.24
VRK1Q99986 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK1Q99986 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VRK1Q99986 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 INE1-201ENST00000456273 945 ntBASIC13.52□□□□□ -0.25
VRK1Q99986 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.52□□□□□ -0.25
VRK1Q99986 WASH4P-201ENST00000564273 1246 ntBASIC13.52□□□□□ -0.25
VRK1Q99986 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
VRK1Q99986 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 CLK3P2-201ENST00000427566 1453 ntBASIC13.52□□□□□ -0.25
VRK1Q99986 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.52□□□□□ -0.25
VRK1Q99986 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VRK1Q99986 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.52□□□□□ -0.25
VRK1Q99986 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VRK1Q99986 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK1Q99986 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 PTENP1-202ENST00000532280 3996 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms