Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 RPL13AP20-201ENST00000459725 609 ntBASIC15.84■□□□□ 0.13
SMOQ99835 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.84■□□□□ 0.13
SMOQ99835 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.84■□□□□ 0.13
SMOQ99835 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.84■□□□□ 0.13
SMOQ99835 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.84■□□□□ 0.13
SMOQ99835 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.84■□□□□ 0.13
SMOQ99835 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.84■□□□□ 0.13
SMOQ99835 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.84■□□□□ 0.13
SMOQ99835 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AP000593.2-201ENST00000542775 1433 ntBASIC15.84■□□□□ 0.13
SMOQ99835 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AC003102.2-201ENST00000589195 1469 ntBASIC15.84■□□□□ 0.13
SMOQ99835 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SMOQ99835 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.83■□□□□ 0.13
SMOQ99835 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.83■□□□□ 0.13
SMOQ99835 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.83■□□□□ 0.13
SMOQ99835 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SMOQ99835 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 AJ011931.1-201ENST00000618749 2492 ntBASIC15.83■□□□□ 0.12
SMOQ99835 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.83■□□□□ 0.12
SMOQ99835 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.83■□□□□ 0.12
SMOQ99835 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.83■□□□□ 0.12
SMOQ99835 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.83■□□□□ 0.12
SMOQ99835 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
SMOQ99835 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 AC009093.2-202ENST00000620513 2079 ntBASIC15.83■□□□□ 0.12
SMOQ99835 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.83■□□□□ 0.12
SMOQ99835 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SMOQ99835 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SMOQ99835 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
SMOQ99835 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMOQ99835 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 RN7SKP175-201ENST00000408472 289 ntBASIC15.82■□□□□ 0.12
SMOQ99835 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.82■□□□□ 0.12
SMOQ99835 MIR1908-201ENST00000410394 80 ntBASIC15.82■□□□□ 0.12
SMOQ99835 AC004945.1-201ENST00000416738 983 ntBASIC15.82■□□□□ 0.12
SMOQ99835 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 HOMER2P2-201ENST00000451621 847 ntBASIC15.82■□□□□ 0.12
SMOQ99835 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 RN7SL560P-201ENST00000577943 264 ntBASIC15.82■□□□□ 0.12
SMOQ99835 PPY2P-201ENST00000582808 702 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms