Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.11■□□□□ 0.33
MTRQ99707 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTRQ99707 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTRQ99707 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.11■□□□□ 0.33
MTRQ99707 AC005912.2-201ENST00000619492 2400 ntBASIC17.11■□□□□ 0.33
MTRQ99707 AC007191.1-201ENST00000623179 2995 ntBASIC17.11■□□□□ 0.33
MTRQ99707 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTRQ99707 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTRQ99707 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MTRQ99707 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTRQ99707 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.11■□□□□ 0.33
MTRQ99707 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MTRQ99707 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
MTRQ99707 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
MTRQ99707 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.1■□□□□ 0.33
MTRQ99707 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.1■□□□□ 0.33
MTRQ99707 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.1■□□□□ 0.33
MTRQ99707 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.1■□□□□ 0.33
MTRQ99707 SLC25A47P1-201ENST00000531577 414 ntBASIC17.1■□□□□ 0.33
MTRQ99707 KRT17P8-201ENST00000540749 863 ntBASIC17.1■□□□□ 0.33
MTRQ99707 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.1■□□□□ 0.33
MTRQ99707 BTNL10-201ENST00000595971 695 ntBASIC17.1■□□□□ 0.33
MTRQ99707 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 BX539320.1-201ENST00000623759 877 ntBASIC17.1■□□□□ 0.33
MTRQ99707 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MTRQ99707 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
MTRQ99707 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 AC007292.2-201ENST00000593524 1812 ntBASIC17.1■□□□□ 0.33
MTRQ99707 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.1■□□□□ 0.33
MTRQ99707 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTRQ99707 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MTRQ99707 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.09■□□□□ 0.33
MTRQ99707 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.09■□□□□ 0.33
MTRQ99707 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MTRQ99707 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 BAATP1-201ENST00000412284 1225 ntBASIC17.09■□□□□ 0.33
MTRQ99707 AC112492.5-201ENST00000421897 457 ntBASIC17.09■□□□□ 0.33
MTRQ99707 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.09■□□□□ 0.33
MTRQ99707 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.09■□□□□ 0.33
MTRQ99707 HILS1-202ENST00000545329 423 ntBASIC17.09■□□□□ 0.33
MTRQ99707 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.09■□□□□ 0.33
MTRQ99707 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 AL158070.2-201ENST00000623713 1621 ntBASIC17.09■□□□□ 0.33
MTRQ99707 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MTRQ99707 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.09■□□□□ 0.33
MTRQ99707 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MTRQ99707 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTRQ99707 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms