Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 AC145423.3-201ENST00000615987 467 ntBASIC15.72■□□□□ 0.11
HAPLN3Q96S86 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 FER1L4-210ENST00000615531 5998 ntBASIC15.72■□□□□ 0.11
HAPLN3Q96S86 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 AP002414.2-201ENST00000591780 3365 ntBASIC15.72■□□□□ 0.11
HAPLN3Q96S86 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HAPLN3Q96S86 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.71■□□□□ 0.11
HAPLN3Q96S86 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HAPLN3Q96S86 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HAPLN3Q96S86 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HAPLN3Q96S86 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HAPLN3Q96S86 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
HAPLN3Q96S86 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 AC106760.1-201ENST00000508690 800 ntBASIC15.7■□□□□ 0.1
HAPLN3Q96S86 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.7■□□□□ 0.1
HAPLN3Q96S86 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms