Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNX27Q96L92 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX27Q96L92 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX27Q96L92 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SNX27Q96L92 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.32■□□□□ 0.2
SNX27Q96L92 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.32■□□□□ 0.2
SNX27Q96L92 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.32■□□□□ 0.2
SNX27Q96L92 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.32■□□□□ 0.2
SNX27Q96L92 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AC023824.1-201ENST00000562945 2975 ntBASIC16.32■□□□□ 0.2
SNX27Q96L92 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AP001527.2-201ENST00000614441 631 ntBASIC16.32■□□□□ 0.2
SNX27Q96L92 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.32■□□□□ 0.2
SNX27Q96L92 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 AC013268.4-201ENST00000637413 2228 ntBASIC16.32■□□□□ 0.2
SNX27Q96L92 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX27Q96L92 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNX27Q96L92 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX27Q96L92 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNX27Q96L92 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX27Q96L92 HOMER2P2-201ENST00000451621 847 ntBASIC16.31■□□□□ 0.2
SNX27Q96L92 Z93015.1-201ENST00000451718 390 ntBASIC16.31■□□□□ 0.2
SNX27Q96L92 KRT18P66-201ENST00000452970 1269 ntBASIC16.31■□□□□ 0.2
SNX27Q96L92 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX27Q96L92 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 EEF1DP1-201ENST00000585891 896 ntBASIC16.31■□□□□ 0.2
SNX27Q96L92 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX27Q96L92 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX27Q96L92 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms