Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.08■□□□□ 0.49
DDX11Q96FC9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.08■□□□□ 0.49
DDX11Q96FC9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX11Q96FC9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AL133267.1-201ENST00000398220 340 ntBASIC18.08■□□□□ 0.48
DDX11Q96FC9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AC025181.2-201ENST00000606994 802 ntBASIC18.08■□□□□ 0.48
DDX11Q96FC9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.08■□□□□ 0.48
DDX11Q96FC9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 MROH4P-201ENST00000431302 1578 ntBASIC18.08■□□□□ 0.48
DDX11Q96FC9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX11Q96FC9 ZBED1P1-201ENST00000502364 1930 ntBASIC18.08■□□□□ 0.48
DDX11Q96FC9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX11Q96FC9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.07■□□□□ 0.48
DDX11Q96FC9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 AP000845.1-201ENST00000581677 2131 ntBASIC18.07■□□□□ 0.48
DDX11Q96FC9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 RPL13AP25-201ENST00000484130 612 ntBASIC18.07■□□□□ 0.48
DDX11Q96FC9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX11Q96FC9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms