Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 AL022342.1-201ENST00000400363 863 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 AZGP1P1-201ENST00000411909 902 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 PGAM5P1-201ENST00000518923 814 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 HNRNPUP1-201ENST00000554987 333 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 RARRES2P9-201ENST00000565168 469 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AC152010.1-201ENST00000415779 2006 ntBASIC13.54□□□□□ -0.24
RFT1Q96AA3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AC005237.2-201ENST00000434368 219 ntBASIC13.54□□□□□ -0.24
RFT1Q96AA3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 CEND1P1-201ENST00000451006 455 ntBASIC13.54□□□□□ -0.24
RFT1Q96AA3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RFT1Q96AA3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RFT1Q96AA3 AL607033.1-201ENST00000623900 1599 ntBASIC13.54□□□□□ -0.24
RFT1Q96AA3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFT1Q96AA3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RFT1Q96AA3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFT1Q96AA3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFT1Q96AA3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RFT1Q96AA3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.53□□□□□ -0.24
RFT1Q96AA3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.53□□□□□ -0.24
RFT1Q96AA3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.53□□□□□ -0.24
RFT1Q96AA3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RFT1Q96AA3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms