Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NCLNQ969V3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
NCLNQ969V3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 MIR661-201ENST00000384842 89 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 AC002472.2-201ENST00000442739 958 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.84□□□□□ -0.03
NCLNQ969V3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.84□□□□□ -0.03
NCLNQ969V3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 SDHAP3-202ENST00000515467 728 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.84□□□□□ -0.03
NCLNQ969V3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.84□□□□□ -0.03
NCLNQ969V3 AC135586.1-201ENST00000539323 574 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.84□□□□□ -0.03
NCLNQ969V3 LINC02560-201ENST00000596379 459 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 AC004840.1-201ENST00000636359 365 ntBASIC14.84□□□□□ -0.03
NCLNQ969V3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NCLNQ969V3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NCLNQ969V3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
NCLNQ969V3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NCLNQ969V3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCLNQ969V3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.83□□□□□ -0.03
NCLNQ969V3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.83□□□□□ -0.03
NCLNQ969V3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCLNQ969V3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NCLNQ969V3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.83□□□□□ -0.03
NCLNQ969V3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.83□□□□□ -0.04
NCLNQ969V3 FAM207CP-201ENST00000443486 507 ntBASIC14.83□□□□□ -0.04
NCLNQ969V3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.83□□□□□ -0.04
NCLNQ969V3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NCLNQ969V3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.83□□□□□ -0.04
NCLNQ969V3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NCLNQ969V3 AC009118.2-201ENST00000613275 655 ntBASIC14.83□□□□□ -0.04
NCLNQ969V3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.83□□□□□ -0.04
NCLNQ969V3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.83□□□□□ -0.04
NCLNQ969V3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 AC131212.3-201ENST00000624087 4219 ntBASIC14.83□□□□□ -0.04
NCLNQ969V3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.83□□□□□ -0.04
NCLNQ969V3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.83□□□□□ -0.04
NCLNQ969V3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NCLNQ969V3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NCLNQ969V3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NCLNQ969V3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.82□□□□□ -0.04
NCLNQ969V3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.82□□□□□ -0.04
NCLNQ969V3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCLNQ969V3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.82□□□□□ -0.04
NCLNQ969V3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NCLNQ969V3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.82□□□□□ -0.04
NCLNQ969V3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NCLNQ969V3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCLNQ969V3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCLNQ969V3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NCLNQ969V3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NCLNQ969V3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.82□□□□□ -0.04
NCLNQ969V3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NCLNQ969V3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms