Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AC000095.1-201ENST00000603208 874 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 AC093813.1-201ENST00000605066 256 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 C18orf15-201ENST00000623680 2534 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM9SF4Q92544 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.41□□□□□ -0.1
TM9SF4Q92544 AL133338.1-201ENST00000565695 1517 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 AC093525.8-201ENST00000624099 1342 ntBASIC14.41□□□□□ -0.1
TM9SF4Q92544 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 LINC01101-201ENST00000622953 1884 ntBASIC14.4□□□□□ -0.1
TM9SF4Q92544 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 AC099336.1-201ENST00000417053 1171 ntBASIC14.4□□□□□ -0.1
TM9SF4Q92544 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
TM9SF4Q92544 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 AC134407.2-201ENST00000625089 1978 ntBASIC14.4□□□□□ -0.1
TM9SF4Q92544 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM9SF4Q92544 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC009090.5-201ENST00000624886 2285 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 ACKR1-201ENST00000368121 1240 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 HNRNPUP1-201ENST00000554987 333 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC010328.2-201ENST00000597698 1111 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms