Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AC134684.3-201ENST00000641758 218 ntBASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC44A1Q8WWI5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 HLA-K-203ENST00000430151 1046 ntBASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AC092183.1-201ENST00000469884 875 ntBASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 AL359881.3-201ENST00000602640 1721 ntBASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC44A1Q8WWI5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 TUBB3P1-201ENST00000405796 1332 ntBASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 AC011474.4-201ENST00000623523 2076 ntBASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC44A1Q8WWI5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms