Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AC015802.1-201ENST00000588104 1449 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 INE2-201ENST00000630399 1874 ntBASIC16.16■□□□□ 0.18
LMO3Q8TAP4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 RN7SL692P-201ENST00000464677 288 ntBASIC16.16■□□□□ 0.18
LMO3Q8TAP4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LMO3Q8TAP4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 SALL4P5-201ENST00000419001 1760 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AC092933.1-201ENST00000393644 945 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AC007969.1-201ENST00000433675 447 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 INE1-201ENST00000456273 945 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 TPT1P11-201ENST00000458482 498 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AC131206.1-201ENST00000538078 1211 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AC132938.2-201ENST00000579188 680 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AL591163.1-201ENST00000641757 987 ntBASIC16.15■□□□□ 0.18
LMO3Q8TAP4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.15■□□□□ 0.18
LMO3Q8TAP4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms