Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 AK5-202ENST00000344720 3929 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 HEXA-AS1-201ENST00000567598 2676 ntBASIC9.18□□□□□ -0.94
SVIPQ8NHG7 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.18□□□□□ -0.94
SVIPQ8NHG7 FAM124B-203ENST00000409685 2509 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ADAM1A-201ENST00000424240 2129 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC006004.1-201ENST00000434887 2145 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PRAMEF15-201ENST00000376152 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 U82695.1-201ENST00000635752 1889 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC018765.1-201ENST00000623357 3446 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC244636.2-201ENST00000448031 1669 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 SLC22A8-210ENST00000545207 1622 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 IGSF9B-201ENST00000321016 4050 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AL391294.1-201ENST00000641352 4068 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC105036.1-201ENST00000566222 271 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC104564.3-201ENST00000582367 638 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ZNF723-201ENST00000600766 2400 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AL109976.1-201ENST00000621919 5678 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PRKCA-AS1-203ENST00000584715 2113 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 C2orf88-201ENST00000340623 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PIP4K2C-201ENST00000354947 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 DLGAP1-218ENST00000581527 3525 ntTSL 2 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SVIPQ8NHG7 OR52K3P-202ENST00000641797 1729 ntBASIC9.17□□□□□ -0.94
SVIPQ8NHG7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC009120.6-201ENST00000616116 1460 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AL161729.1-201ENST00000604104 1402 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 Z82209.2-201ENST00000623410 2012 ntBASIC9.16□□□□□ -0.94
SVIPQ8NHG7 AC067863.2-201ENST00000559120 1980 ntTSL 2 BASIC9.16□□□□□ -0.94
SVIPQ8NHG7 GINS3-202ENST00000328514 1932 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms