Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PIK3C3Q8NEB9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PIK3C3Q8NEB9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 SPDYE7P-202ENST00000420373 878 ntBASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 GHSR-202ENST00000427970 912 ntBASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PIK3C3Q8NEB9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC092135.3-201ENST00000624151 1846 ntBASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC018529.2-202ENST00000611482 3087 ntBASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC018529.1-201ENST00000613063 361 ntBASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC139530.3-201ENST00000620344 690 ntBASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AP000845.1-201ENST00000581677 2131 ntBASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms