Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC004923.1-202ENST00000642106 209 ntBASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 AC006335.1-201ENST00000445200 547 ntBASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 DUX4L47-201ENST00000566374 394 ntBASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 AC026740.1-201ENST00000607068 791 ntBASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 AL136295.7-201ENST00000619226 1200 ntBASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.37■□□□□ 0.05
SYNPOQ8N3V7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 AL513477.1-201ENST00000602865 2407 ntBASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 AC134698.3-201ENST00000523880 214 ntBASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 AL805961.1-203ENST00000641078 1258 ntBASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 CLUHP2-201ENST00000426660 1303 ntBASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SYNPOQ8N3V7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms