Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AC148477.4-201ENST00000613430 1793 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 GOLGA2P4-201ENST00000441462 777 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AC114812.1-204ENST00000449669 728 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AC023310.1-201ENST00000554836 735 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 AC105250.1-201ENST00000509378 2057 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 NORAD-201ENST00000565493 5339 ntBASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PHTF2Q8N3S3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 RNA5SP486-201ENST00000515961 83 ntBASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 AL606495.2-201ENST00000605867 535 ntBASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PHTF2Q8N3S3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PHTF2Q8N3S3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.71■□□□□ 0.1
PHTF2Q8N3S3 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.7■□□□□ 0.1
PHTF2Q8N3S3 AC092127.1-201ENST00000567093 3455 ntBASIC15.7■□□□□ 0.1
PHTF2Q8N3S3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHTF2Q8N3S3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.7■□□□□ 0.1
PHTF2Q8N3S3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms