Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 FTH1P18-201ENST00000412071 549 ntBASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 TPT1P9-201ENST00000413759 514 ntBASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 OR4C14P-201ENST00000440929 923 ntBASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 RN7SL87P-201ENST00000497657 288 ntBASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 ABCC6P2-201ENST00000526069 590 ntBASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTBP4Q8N2S1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 RN7SL788P-201ENST00000460504 316 ntBASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 OR52V1P-201ENST00000515557 898 ntBASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 AC022966.2-201ENST00000587434 367 ntBASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 AL359091.4-201ENST00000610052 409 ntBASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LTBP4Q8N2S1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.14■□□□□ 0.82
LTBP4Q8N2S1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LTBP4Q8N2S1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.14■□□□□ 0.82
LTBP4Q8N2S1 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 AC099328.1-201ENST00000498809 1030 ntBASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 AC048382.6-201ENST00000621980 1223 ntBASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTBP4Q8N2S1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 AC023090.2-201ENST00000625182 2110 ntBASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 MIR339-201ENST00000362153 94 ntBASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 AIG1-203ENST00000367596 559 ntTSL 2 BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 LINC00265-2P-201ENST00000413372 782 ntBASIC20.13■□□□□ 0.81
LTBP4Q8N2S1 AL359092.2-201ENST00000423330 585 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms