Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 ACTBP8-201ENST00000403258 1108 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 USP32P1-208ENST00000506594 1164 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 AC015936.2-201ENST00000593177 259 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 EIF3FP3-201ENST00000434851 1086 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 BCRP2-202ENST00000447763 634 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 BCRP6-201ENST00000510112 632 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 BCRP7-201ENST00000511549 544 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AC022616.1-201ENST00000518688 554 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 BTNL10-201ENST00000595971 695 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AC145423.3-201ENST00000615987 467 ntBASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SCUBE3Q8IX30 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AL513477.1-201ENST00000602865 2407 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AC063926.3-201ENST00000624734 5658 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms