Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SHFQ7M4L6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHFQ7M4L6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AC026150.2-201ENST00000564693 1156 ntBASIC13.8□□□□□ -0.2
SHFQ7M4L6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHFQ7M4L6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.8□□□□□ -0.2
SHFQ7M4L6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 GPS2P2-201ENST00000430745 888 ntBASIC13.79□□□□□ -0.2
SHFQ7M4L6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 KRT18P64-201ENST00000434946 1219 ntBASIC13.79□□□□□ -0.2
SHFQ7M4L6 SPDYE14P-201ENST00000442619 822 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms