Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCN1P1Q5VSP4 KRT8P12-202ENST00000472924 1397 ntBASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LCN1P1Q5VSP4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 AL133267.1-201ENST00000398220 340 ntBASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 HTR5BP-201ENST00000430851 1154 ntBASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 MTDHP5-201ENST00000598980 586 ntBASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 AL359881.3-201ENST00000602640 1721 ntBASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 CICP17-201ENST00000418553 2377 ntBASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LCN1P1Q5VSP4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AC004832.2-201ENST00000426397 482 ntBASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AL121894.2-201ENST00000602977 491 ntBASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AC007967.4-201ENST00000614700 386 ntBASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AL645728.2-202ENST00000641679 227 ntBASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 AP000845.1-201ENST00000581677 2131 ntBASIC13.82□□□□□ -0.2
LCN1P1Q5VSP4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms