Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 BRWD1P1-201ENST00000401091 371 ntBASIC20.8■□□□□ 0.92
CDCA8Q53HL2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 AC092658.1-201ENST00000505836 891 ntBASIC20.8■□□□□ 0.92
CDCA8Q53HL2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 FER1L4-210ENST00000615531 5998 ntBASIC20.8■□□□□ 0.92
CDCA8Q53HL2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 KRT8P4-201ENST00000509735 1454 ntBASIC20.8■□□□□ 0.92
CDCA8Q53HL2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA8Q53HL2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 BTBD6P1-201ENST00000412176 1267 ntBASIC20.79■□□□□ 0.92
CDCA8Q53HL2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 MTX1P1-201ENST00000440904 838 ntBASIC20.79■□□□□ 0.92
CDCA8Q53HL2 GOLGA2P4-201ENST00000441462 777 ntBASIC20.79■□□□□ 0.92
CDCA8Q53HL2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 PFN1P12-201ENST00000455938 534 ntBASIC20.79■□□□□ 0.92
CDCA8Q53HL2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 SALL4P5-201ENST00000419001 1760 ntBASIC20.79■□□□□ 0.92
CDCA8Q53HL2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA8Q53HL2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 MIR6799-201ENST00000620297 69 ntBASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AC002472.3-201ENST00000640124 621 ntBASIC20.78■□□□□ 0.92
CDCA8Q53HL2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA8Q53HL2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CDCA8Q53HL2 INE2-201ENST00000630399 1874 ntBASIC20.77■□□□□ 0.92
CDCA8Q53HL2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA8Q53HL2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA8Q53HL2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA8Q53HL2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms