Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.68■□□□□ 0.26
KCNA1Q09470 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNA1Q09470 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KCNA1Q09470 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC055811.4-201ENST00000624039 1754 ntBASIC16.67■□□□□ 0.26
KCNA1Q09470 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KCNA1Q09470 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.67■□□□□ 0.26
KCNA1Q09470 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNA1Q09470 TTTY23B-201ENST00000442790 549 ntBASIC16.67■□□□□ 0.26
KCNA1Q09470 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.67■□□□□ 0.26
KCNA1Q09470 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KCNA1Q09470 AL358472.5-202ENST00000641448 1267 ntBASIC16.67■□□□□ 0.26
KCNA1Q09470 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNA1Q09470 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNA1Q09470 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KCNA1Q09470 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 SLC25A47P1-201ENST00000531577 414 ntBASIC16.66■□□□□ 0.26
KCNA1Q09470 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 PTP4A1P2-201ENST00000546033 454 ntBASIC16.66■□□□□ 0.26
KCNA1Q09470 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 GNRHR2-203ENST00000581100 1187 ntBASIC16.66■□□□□ 0.26
KCNA1Q09470 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC145423.3-201ENST00000615987 467 ntBASIC16.66■□□□□ 0.26
KCNA1Q09470 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KCNA1Q09470 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms