Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AL359881.3-201ENST00000602640 1721 ntBASIC14.46□□□□□ -0.09
CHRNB3Q05901 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 DMBT1P1-203ENST00000636837 4628 ntBASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AL135744.1-201ENST00000565098 629 ntBASIC14.46□□□□□ -0.09
CHRNB3Q05901 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC027796.2-201ENST00000575326 344 ntBASIC14.46□□□□□ -0.09
CHRNB3Q05901 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRNB3Q05901 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRNB3Q05901 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.46□□□□□ -0.1
CHRNB3Q05901 AC152010.1-201ENST00000415779 2006 ntBASIC14.46□□□□□ -0.1
CHRNB3Q05901 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CHRNB3Q05901 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CHRNB3Q05901 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.46□□□□□ -0.1
CHRNB3Q05901 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRNB3Q05901 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.46□□□□□ -0.1
CHRNB3Q05901 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TFAMP1-201ENST00000412727 736 ntBASIC14.45□□□□□ -0.1
CHRNB3Q05901 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 PEG13-201ENST00000631594 5667 ntBASIC14.45□□□□□ -0.1
CHRNB3Q05901 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRNB3Q05901 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRNB3Q05901 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC138969.3-201ENST00000546612 1459 ntBASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC138932.2-201ENST00000548268 1459 ntBASIC14.44□□□□□ -0.1
CHRNB3Q05901 AC126755.4-201ENST00000549796 1459 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms