Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDR2Q01850 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 SNX18-202ENST00000343017 3140 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 AC140479.7-201ENST00000636301 2332 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 NUS1P3-201ENST00000423502 862 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 AL442647.2-201ENST00000429864 857 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.22■□□□□ 0.19
CDR2Q01850 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.22■□□□□ 0.19
CDR2Q01850 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.22■□□□□ 0.19
CDR2Q01850 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.22■□□□□ 0.19
CDR2Q01850 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CDR2Q01850 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 AL137783.1-201ENST00000623494 1896 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 MTHFR-210ENST00000641407 2387 ntBASIC16.22■□□□□ 0.19
CDR2Q01850 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDR2Q01850 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
CDR2Q01850 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.21■□□□□ 0.19
CDR2Q01850 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CDR2Q01850 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
CDR2Q01850 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 AC023908.3-201ENST00000564211 3047 ntBASIC16.21■□□□□ 0.19
CDR2Q01850 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.21■□□□□ 0.19
CDR2Q01850 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.21■□□□□ 0.19
CDR2Q01850 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.21■□□□□ 0.19
CDR2Q01850 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.21■□□□□ 0.19
CDR2Q01850 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 AC124283.3-201ENST00000570869 594 ntBASIC16.21■□□□□ 0.19
CDR2Q01850 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.21■□□□□ 0.19
CDR2Q01850 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.21■□□□□ 0.19
CDR2Q01850 AC007431.3-201ENST00000623221 587 ntBASIC16.21■□□□□ 0.19
CDR2Q01850 BX539320.1-201ENST00000623759 877 ntBASIC16.21■□□□□ 0.19
CDR2Q01850 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.21■□□□□ 0.19
CDR2Q01850 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.21■□□□□ 0.19
CDR2Q01850 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDR2Q01850 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDR2Q01850 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
CDR2Q01850 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CDR2Q01850 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDR2Q01850 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDR2Q01850 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDR2Q01850 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
CDR2Q01850 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.2■□□□□ 0.18
CDR2Q01850 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDR2Q01850 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDR2Q01850 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 C1QBPP1-201ENST00000400117 770 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms