Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX3P78415 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
IRX3P78415 ELK2AP-201ENST00000392510 1007 ntBASIC17.73■□□□□ 0.43
IRX3P78415 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 AL662890.1-201ENST00000396818 632 ntBASIC17.73■□□□□ 0.43
IRX3P78415 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.73■□□□□ 0.43
IRX3P78415 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX3P78415 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 AL451050.2-201ENST00000606967 682 ntBASIC17.73■□□□□ 0.43
IRX3P78415 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX3P78415 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.73■□□□□ 0.43
IRX3P78415 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IRX3P78415 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.73■□□□□ 0.43
IRX3P78415 AC144831.1-201ENST00000573312 2656 ntBASIC17.73■□□□□ 0.43
IRX3P78415 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IRX3P78415 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
IRX3P78415 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX3P78415 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX3P78415 PPY2P-201ENST00000582808 702 ntBASIC17.72■□□□□ 0.43
IRX3P78415 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IRX3P78415 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.72■□□□□ 0.43
IRX3P78415 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.72■□□□□ 0.43
IRX3P78415 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
IRX3P78415 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IRX3P78415 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.71■□□□□ 0.43
IRX3P78415 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.71■□□□□ 0.43
IRX3P78415 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.71■□□□□ 0.43
IRX3P78415 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.71■□□□□ 0.43
IRX3P78415 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 NDUFV2P1-201ENST00000596415 907 ntBASIC17.71■□□□□ 0.43
IRX3P78415 AC007663.3-201ENST00000609632 465 ntBASIC17.71■□□□□ 0.43
IRX3P78415 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
IRX3P78415 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
IRX3P78415 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX3P78415 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms