Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H3AP68431 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H3AP68431 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 MYCLP2-201ENST00000449268 967 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC114812.1-204ENST00000449669 728 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 ENPP7P5-201ENST00000541031 1031 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC004233.3-201ENST00000607794 1269 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 AL603764.1-201ENST00000636452 321 ntBASIC13.28□□□□□ -0.28
HIST1H3AP68431 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST1H3AP68431 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST1H3AP68431 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST1H3AP68431 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.27□□□□□ -0.28
HIST1H3AP68431 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.27□□□□□ -0.28
HIST1H3AP68431 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
HIST1H3AP68431 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HIST1H3AP68431 AC023090.2-201ENST00000625182 2110 ntBASIC13.27□□□□□ -0.28
HIST1H3AP68431 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms