Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 AC015656.1-201ENST00000624209 3578 ntBASIC14.18□□□□□ -0.14
PER3P56645 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 AP001282.1-201ENST00000531301 1499 ntBASIC14.18□□□□□ -0.14
PER3P56645 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
PER3P56645 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.17□□□□□ -0.14
PER3P56645 AC134915.1-201ENST00000426461 574 ntBASIC14.17□□□□□ -0.14
PER3P56645 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.17□□□□□ -0.14
PER3P56645 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
PER3P56645 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.17□□□□□ -0.14
PER3P56645 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.17□□□□□ -0.14
PER3P56645 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PER3P56645 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 AC005840.4-201ENST00000541242 2494 ntBASIC14.17□□□□□ -0.14
PER3P56645 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.17□□□□□ -0.14
PER3P56645 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PER3P56645 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PER3P56645 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PER3P56645 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 Z97205.2-201ENST00000564697 1639 ntBASIC14.16□□□□□ -0.14
PER3P56645 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 AZGP1P1-201ENST00000411909 902 ntBASIC14.16□□□□□ -0.14
PER3P56645 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 HIST3H2BA-201ENST00000436555 524 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms