Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXG1P55316 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXG1P55316 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 RHOXF1P1-202ENST00000635473 501 ntBASIC13.29□□□□□ -0.28
FOXG1P55316 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 AJ011931.1-201ENST00000618749 2492 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 AC006001.1-201ENST00000325130 474 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 TPM3P8-201ENST00000330554 643 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXG1P55316 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 RNA5SP486-201ENST00000515961 83 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 AP003171.2-201ENST00000528208 925 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
FOXG1P55316 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 AP005482.1-201ENST00000563722 1273 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 RN7SL48P-201ENST00000579283 293 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.28□□□□□ -0.28
FOXG1P55316 AL359881.2-201ENST00000602973 570 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CLUHP2-201ENST00000426660 1303 ntBASIC13.28□□□□□ -0.28
FOXG1P55316 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.28□□□□□ -0.28
FOXG1P55316 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FOXG1P55316 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.28□□□□□ -0.28
FOXG1P55316 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.27□□□□□ -0.28
FOXG1P55316 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
FOXG1P55316 TNRC18P2-201ENST00000417666 2714 ntBASIC13.27□□□□□ -0.28
FOXG1P55316 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.27□□□□□ -0.28
FOXG1P55316 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.27□□□□□ -0.28
FOXG1P55316 INE2-201ENST00000630399 1874 ntBASIC13.27□□□□□ -0.28
FOXG1P55316 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.27□□□□□ -0.28
FOXG1P55316 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
FOXG1P55316 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
FOXG1P55316 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.27□□□□□ -0.28
FOXG1P55316 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FOXG1P55316 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.27□□□□□ -0.29
FOXG1P55316 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.27□□□□□ -0.29
FOXG1P55316 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
FOXG1P55316 AC245100.3-201ENST00000441281 285 ntBASIC13.27□□□□□ -0.29
FOXG1P55316 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.27□□□□□ -0.29
FOXG1P55316 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.27□□□□□ -0.29
FOXG1P55316 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms